clone 9

Clone number
clone 9
Clone name
 (database links)
yk385e11
(EST database)(NEXTDB) (Sanger Centre)
cDNA group
 (database links)
CELK02567
(EST database)(NEXTDB)
Cosmid or YAC
T03F1
CDS identification number
T03F1.5
database links
(Wormpep)
(WormBase)
(Worm PD)
BLAST search results
BLASTP against nr-aa
TBLASTN against human EST
TBLASTN against mouse EST
Homologues or conserved domains
S/T protein phosphatase PP1 
No. of C. elegans paralogues (E<1e-50)
29
Differential hybridization
Spot address on
high-density grid
Signal intensity for
F cDNA probe
Signal intensity for
R cDNA probe
009P12
13.84
-
RNAi phenotype
Sterile
embryonic viability (of F1)
91.0 %
sterility (laid no eggs)
0% (0 out of 8 F1 animals)
sterility (laid more than 5 unfertilized eggs)
100% (8 out of 8 F1 animals)
clone    number 9
clone name yk385e11
clone family CELK 02567
gene name T03F1.5
homology S/T protein phosphatase PP1
motif -
in situ hybridization L4 germline 
RNAi Spermatogenesis defects

in situ hybridization:Staining was observed during L4 in hermaphrodite and at all stage in male, when the spermatogenesis occured.
 

RNAi:Hermaphrodites did not have sperm and laid eggs with apperarance similar to un fertilized eggs. Males did not show any defects.
 
P0
No. of unfertilized eggs No. of eggs No. of hatched eggs Hatching rate (%)
0 85 76 89.4
0 75 69 92.0
0 68 60 88.2
0 92 77 83.7
F1
No. of unfertilized eggs No. of eggs No. of hatched eggs Hatching rate (%)
10 47 14 37.8
11 44 8 24.2
13 37 3 12.5
9 27 1 5.6
8 43 3 8.6
10 43 5 15.2
10 34 5 20.8
3 26 0 0
11 27 6 37.5
13 42 0 0
1 29 0 0
16 31 0 0
10 32 3 13.6
15 34 1 5.3

Photos

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