Score E
Sequences producing significant alignments: (bits) Value
gb|AI326532.1|AI326532 ml51g11.y1 Stratagene mouse testis (... 208 1e-52
gb|AA673813.1|AA673813 vu08g08.r1 Barstead mouse myotubes M... 205 8e-52
gb|W34677.1|W34677 mc59f06.r1 Soares mouse embryo NbME13.5 ... 170 2e-41
gb|AI614084.1|AI614084 vg36b11.y1 Soares_mammary_gland_NbMM... 162 5e-39
gb|AA065472.1|AA065472 ml51g11.r1 Stratagene mouse testis (... 141 2e-32
gb|AI322480.1|AI322480 mh23g03.y1 Soares mouse placenta 4Nb... 136 3e-31
gb|AI323732.1|AI323732 ml51g11.x1 Stratagene mouse testis (... 69 8e-25
dbj|AU016055.1|AU016055 AU016055 Mouse two-cell stage embry... 92 1e-17
gb|AI324119.1|AI324119 mh23g03.x1 Soares mouse placenta 4Nb... 73 5e-12
gb|W41682.1|W41682 mc63f04.r1 Soares mouse embryo NbME13.5 ... 58 1e-11
dbj|AU017378.1|AU017378 AU017378 Mouse two-cell stage embry... 68 3e-11
dbj|BB040729.1|BB040729 BB040729 RIKEN full-length enriched... 61 3e-08
dbj|AV283109.1|AV283109 AV283109 RIKEN full-length enriched... 60 6e-08
gb|AA510360.1|AA510360 vg36b11.r1 Soares_mammary_gland_NbMM... 58 2e-07
dbj|BB287008.1|BB287008 BB287008 RIKEN full-length enriched... 54 3e-06
dbj|BB286632.1|BB286632 BB286632 RIKEN full-length enriched... 51 2e-05
gb|AA549652.1|AA549652 vk80g08.s1 Knowles Solter mouse 2 ce... 45 0.002
dbj|AV282164.1|AV282164 AV282164 RIKEN full-length enriched... 44 0.003
dbj|AV256209.1|AV256209 AV256209 RIKEN full-length enriched... 42 0.014
dbj|AV042071.2|AV042071 AV042071 Mus musculus adult C57BL/6... 36 0.043
dbj|AV106848.1|AV106848 AV106848 Mus musculus liver C57BL/6... 40 0.055
gb|AA014994.1|AA014994 mh23g03.r1 Soares mouse placenta 4Nb... 39 0.095
dbj|AV170426.1|AV170426 AV170426 Mus musculus head C57BL/6J... 38 0.21
gb|AI613752.1|AI613752 vh95a12.y1 Barstead mouse myotubes M... 32 9.3
gb|AA517882.1|AA517882 vh95a12.r1 Barstead mouse myotubes M... 32 9.3
Alignments
>gb|AI326532.1|AI326532 ml51g11.y1 Stratagene mouse testis (#937308) Mus musculus cDNA
clone IMAGE:515588 5' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 761
Score = 208 bits (523), Expect = 1e-52
Identities = 96/177 (54%), Positives = 131/177 (73%), Gaps = 2/177 (1%)
Frame = +2
Query: 49 ESPHSSVALLRKAGKVSVLSDFIKESSSDLDMDMEYNIHCGIAHTRWATHGSPRDVNSHP 108
E+ + L++K GKV L + + + D+D+D+E+++H GIAHTRWATHG P VNSHP
Sbjct: 17 EANACKIQLIKKKGKVKALDEEVHKQQ-DMDLDIEFDVHLGIAHTRWATHGEPNPVNSHP 193
Query: 109 HRSNDKNEFLVVHNGIITNYREIKEYLEKKGHKFESETDTEVIAKLAQHIHDRY--PDFS 166
RS+ NEF+V+HNGIITNY+++K++LE KG+ FESETDTE IAKL ++++D + D S
Sbjct: 194 QRSDKNNEFIVIHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNWESQDVS 373
Query: 167 FRQLVETVIQQLEGAFALAFKSSRFPGQLVASRRGSPLLVGIKSNSRLQTNHFPVSF 223
F VE VIQQLE A AL FKS FPGQ V +RRGSPLL+G++S +L T+H P+ +
Sbjct: 374 FTTFVERVIQQLECALALVFKSVHFPGQAVCTRRGSPLLIGVRSEHKLSTDHIPILY 544
Score = 44.1 bits (102), Expect = 0.003
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +1
Query: 299 EYFVASDAAAIIEHTKQVLFLEDDDVAFVEDGALTIHRISR 339
EY+ ASDA+A+IEHT +V+ +DDVA DG +I+ I R
Sbjct: 631 EYYFASDASAVIEHTNRVISPVEDDVAASVDGPXSIYLIKR 753
>gb|AA673813.1|AA673813 vu08g08.r1 Barstead mouse myotubes MPLRB5 Mus musculus cDNA clone
IMAGE:1180094 5' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 746
Score = 205 bits (516), Expect = 8e-52
Identities = 99/201 (49%), Positives = 145/201 (71%), Gaps = 4/201 (1%)
Frame = +3
Query: 1 MCGIFAYLNFLTPKKRSEIVDILVQGLQRMEYRGYDSAGIAIDGSNEI--ESPHSSVALL 58
MCGIFAYL++ P+ R EI++ L++GLQR+EY GYDSAG+ +DG N+ E+ + L+
Sbjct: 3 MCGIFAYLHYHVPRTRREILETLIKGLQRLEYTGYDSAGVGLDGGNDKDWEANACKIQLI 182
Query: 59 RKAGKVSVLSDFIKESSSDLDMDMEYNIHCGIAHTRWATHGSPRDVNSHPHRSNDKNEFL 118
+K GKV L + + + D+D+D+E+++H GIAHTR AT G P VNSHP RS+ +EF+
Sbjct: 183 KKKGKVKALDEEVHKQL-DMDLDIEFDVHLGIAHTR*ATPGEPNPVNSHPQRSDTNSEFI 359
Query: 119 VVHNGIITNYREIKEYLEKKGHKFESETDTEVIAKLAQHIHDRY--PDFSFRQLVETVIQ 176
V+H+GIITNY +++++LE KG+ FESETDT+ IAKL ++++D + D S LV+ VI+
Sbjct: 360 VIHSGIITNYTDLRKFLESKGYDFESETDTDTIAKLVKYMYDNWESQDVSVTTLVQRVIR 539
Query: 177 QLEGAFALAFKSSRFPGQLVA 197
+L AFAL S FPG+ +A
Sbjct: 540 KLRSAFALGV*SCHFPGKQLA 602
>gb|W34677.1|W34677 mc59f06.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone IMAGE:352835 5' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 421
Score = 170 bits (427), Expect = 2e-41
Identities = 82/139 (58%), Positives = 107/139 (75%)
Frame = +1
Query: 587 GRGLNFATCLEGALKIKELSYMHCEGIMSGELKHGPLAMVDEFLSICMVVCNDRVYKKSL 646
G G ++ATCLEGALKIKE++YMH EGI++GELKHGPLA+VD+ + + M++ D Y K
Sbjct: 7 GAGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRDHTYAKCQ 186
Query: 647 NALQQVVARKGAPIIIADCTVPEGDLAGMKHILRVPKTVDCVQNILTVIPLQLLSYHIAE 706
NALQQVVAR+G P++I D E + K ++VP +VDC+Q IL+VIPLQLL++H+A
Sbjct: 187 NALQQVVARQGRPVVICDKEDTE-TIKNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLAV 363
Query: 707 LNGANVDRPRNLAKSVTVE 725
L G +VD PRNLAKSVTVE
Sbjct: 364 LRGYDVDFPRNLAKSVTVE 420
>gb|AI614084.1|AI614084 vg36b11.y1 Soares_mammary_gland_NbMMG Mus musculus cDNA clone
IMAGE:863421 5' similar to SW:GFAT_HUMAN Q06210
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
[ISOMERIZING] ;.
Length = 332
Score = 162 bits (407), Expect = 5e-39
Identities = 77/110 (70%), Positives = 93/110 (84%)
Frame = +3
Query: 471 DTLLALRYCKPRGALTIGVTNTVGSSICRESHCGIHINAGPEIGVASTKAYTSQILSLLM 530
DTLLALRYCK RGALT+G+TNTVGSSI RE+ CG+HINAGPEIGVASTKAYTSQ +SL+M
Sbjct: 3 DTLLALRYCKDRGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTKAYTSQFISLVM 182
Query: 531 FALTLSDDRISMAKRREEIIDALNDLPELIREVLQLDEKVLDIAKQIYKE 580
F L +S+DRIS+ RR+EII L LPELI+EVL LDEK+ D+ ++Y +
Sbjct: 183 FGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLDEKIHDLGLELYTQ 332
>gb|AA065472.1|AA065472 ml51g11.r1 Stratagene mouse testis (#937308) Mus musculus cDNA
clone IMAGE:515588 5' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 356
Score = 141 bits (351), Expect = 2e-32
Identities = 61/114 (53%), Positives = 87/114 (75%)
Frame = +1
Query: 49 ESPHSSVALLRKAGKVSVLSDFIKESSSDLDMDMEYNIHCGIAHTRWATHGSPRDVNSHP 108
E+ + L++K GKV L + + + D+D+D+E+++H GIAHTRWATHG P VNSHP
Sbjct: 16 EANACKIQLIKKKGKVKALDEEVHKQQ-DMDLDIEFDVHLGIAHTRWATHGEPNPVNSHP 192
Query: 109 HRSNDKNEFLVVHNGIITNYREIKEYLEKKGHKFESETDTEVIAKLAQHIHDRY 162
RS+ NEF+V+HNGIITNY+++K++LE KG+ FESETDTE IAKL +++ D +
Sbjct: 193 QRSDKNNEFIVIHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMCDNW 354
>gb|AI322480.1|AI322480 mh23g03.y1 Soares mouse placenta 4NbMP13.5 14.5 Mus musculus cDNA
clone IMAGE:443380 5' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 450
Score = 136 bits (340), Expect = 3e-31
Identities = 61/114 (53%), Positives = 84/114 (73%), Gaps = 2/114 (1%)
Frame = +3
Query: 1 MCGIFAYLNFLTPKKRSEIVDILVQGLQRMEYRGYDSAGIAIDGSN--EIESPHSSVALL 58
MCGIFAYLN+ P+ R EI++ L++GLQR+EYRGYDSAG+ +DG N + E+ + L+
Sbjct: 108 MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGLDGGNDKDWEANACKIQLI 287
Query: 59 RKAGKVSVLSDFIKESSSDLDMDMEYNIHCGIAHTRWATHGSPRDVNSHPHRSN 112
+K GKV L + + D+D+D+E+++H GIAHTRWATHG P VNSHP RS+
Sbjct: 288 KKKGKVKALDEEV-HKQQDMDLDIEFDVHLGIAHTRWATHGEPNPVNSHPQRSD 446
>gb|AI323732.1|AI323732 ml51g11.x1 Stratagene mouse testis (#937308) Mus musculus cDNA
clone IMAGE:515588 3' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 427
Score = 69.5 bits (167), Expect(2) = 8e-25
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = -1
Query: 611 EGIMSGELKHGPLAMVDEFLSICMVVCNDRVYKKSLNALQQVVARKGAPIIIAD 664
EGI++GELKHG LA+VD+ + + M++ D Y K NALQQVVAR+G P++I D
Sbjct: 340 EGILAGELKHGHLALVDKLMPVIMIIMRDHTYGKCQNALQQVVARQGRPVVICD 179
Score = 67.1 bits (161), Expect(2) = 8e-25
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -3
Query: 676 KHILRVPKTVDCVQNILTVIPLQLLSYHIAELNGANVDRPRNLAKSVTV 724
K ++VP +VDC+Q I++VIPLQLL++H+A + G +VD PRNLAKSVTV
Sbjct: 149 KEAIKVPHSVDCLQGIISVIPLQLLAFHLAVMRGYDVDFPRNLAKSVTV 3
>dbj|AU016055.1|AU016055 AU016055 Mouse two-cell stage embryo cDNA Mus musculus cDNA clone
J0720B02 3'.
Length = 354
Score = 91.7 bits (224), Expect = 1e-17
Identities = 47/79 (59%), Positives = 60/79 (75%)
Frame = -3
Query: 647 NALQQVVARKGAPIIIADCTVPEGDLAGMKHILRVPKTVDCVQNILTVIPLQLLSYHIAE 706
NALQQVVAR+G P++I D E + K ++VP +VDC+Q IL+VIPLQLL++H+A
Sbjct: 352 NALQQVVARQGRPVVICDKEDTE-TIKNTKRTIKVPHSVDCLQGILSVIPLQLLAFHLAV 176
Query: 707 LNGANVDRPRNLAKSVTVE 725
L G +VD PRNLAKSVTVE
Sbjct: 175 LRGYDVDFPRNLAKSVTVE 119
>gb|AI324119.1|AI324119 mh23g03.x1 Soares mouse placenta 4NbMP13.5 14.5 Mus musculus cDNA
clone IMAGE:443380 3' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 456
Score = 73.4 bits (177), Expect = 5e-12
Identities = 31/58 (53%), Positives = 42/58 (71%)
Frame = -1
Query: 58 LRKAGKVSVLSDFIKESSSDLDMDMEYNIHCGIAHTRWATHGSPRDVNSHPHRSNDKN 115
L+K GKV L + + + D+D+D+E+++H GIAHTRWATHG P VNSHP RS+ N
Sbjct: 372 LKKKGKVKALDEEVHKQQ-DMDLDIEFDVHLGIAHTRWATHGEPNPVNSHPQRSDKNN 202
>gb|W41682.1|W41682 mc63f04.r1 Soares mouse embryo NbME13.5 14.5 Mus musculus cDNA
clone IMAGE:353215 5' similar to gb:M90516
GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE
(HUMAN);.
Length = 438
Score = 58.2 bits (138), Expect(2) = 1e-11
Identities = 27/65 (41%), Positives = 41/65 (62%)
Frame = +2
Query: 625 MVDEFLSICMVVCNDRVYKKSLNALQQVVARKGAPIIIADCTVPEGDLAGMKHILRVPKT 684
+VD+ + + M++ D Y K NALQQVVAR+G P++I D E + K ++VP +
Sbjct: 146 LVDKLMPVIMIIMRDHTYAKCQNALQQVVARQGRPVVICDKEDTE-TIKNTKRTIKVPHS 322
Query: 685 VDCVQ 689
VDC+Q
Sbjct: 323 VDCLQ 337
Score = 33.6 bits (75), Expect(2) = 1e-11
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 587 GRGLNFATCLE-GALKIKELSYMHC-EGIMSGELKHGPLAM 625
G +ATCLE G+ K E++ C + + GELKHGPLA+
Sbjct: 25 GGATMYATCLERGSXKSTEIT*YACRKASLRGELKHGPLAI 147
Database: GenBank Mouse EST entries
Posted date: Jul 9, 2000 8:11 PM
Number of letters in database: 441,526,214
Number of sequences in database: 1,284,374
Lambda K H
0.320 0.136 0.391
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328499976
Number of Sequences: 1284374
Number of extensions: 3844206
Number of successful extensions: 16912
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 16880
Number of HSP's gapped (non-prelim): 30
length of query: 725
length of database: 147,175,404
effective HSP length: 57
effective length of query: 668
effective length of database: 73,966,086
effective search space: 49409345448
effective search space used: 49409345448
frameshift window, decay const: 50, 0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 72 (32.5 bits)
