FastQCFastQC Report
Thu 15 Aug 2019
SRR6322569_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6322569_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2570876
Sequences flagged as poor quality0
Sequence length251
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCCCA217940.8477266114740657No Hit
GTTCGCGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGG203110.7900419934683742No Hit
CCTGCATGTAGATCCCTATAAGCCATGTTTTGTTCCAGAACCTGTTCAGG159270.6195164605371866No Hit
CGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGACCGG111900.43526019924726045No Hit
CTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCTGC62840.24443030313402903No Hit
CGCGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGACC59860.2328389233864255No Hit
GTGCCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCC59610.23186649219954597No Hit
CGTTGACAATCTGACACTCATCTTCATCACTTCACTGGTATCGTCGCCCA52130.20277135108811162No Hit
CCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCCCAG47340.18413956954750055No Hit
CTGAGTGATCGCGGTCTGCATCTGCAGGCTGAGGAAAGTCCATGCCCGCA47190.18355611083537285No Hit
ATGGTCTCGACATTGCTTTTCGCGCATGCGGTGCACCTCGGAGGCTCGGC44920.17472643565850707No Hit
CTCGACATTGCTTTTCGCGCATGCGGTGCACCTCGGAGGCTCGGCTCCGT43850.17056443017866282No Hit
TCTCGACATTGCTTTTCGCGCATGCGGTGCACCTCGGAGGCTCGGCTCCG41130.15998437886541397No Hit
TGCCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCCC40260.15660031833507332No Hit
CCCTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCT38120.14827630737538489No Hit
TCGCGCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGAC37860.14726497894103022No Hit
CACGCTTCGGTTATGCCTGCCAAACGCTTGGAACAGAACTTTTGGTCACC35480.13800743404193747No Hit
CTGCATGTAGATCCCTATAAGCCATGTTTTGTTCCAGAACCTGTTCAGGC32100.12486016439532673No Hit
GCCTGCATGTAGATCCCTATAAGCCATGTTTTGTTCCAGAACCTGTTCAG31570.1227986102791422No Hit
CAAAGGGGTGATTCCATTGGAATCATTTTTGGTGCTAACTGTGAAGTAAT30240.11762527636494333No Hit
CCTGCTACATGCGGCTCTACACCCATAGCCGATTTATTTAAAATTCGCTG29180.11350216813257427No Hit
CGCCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGGGCCC29040.11295760666792175No Hit
CCGTTGACAATCTGACACTCATCTTCATCACTTCACTGGTATCGTCGCCC28910.11245194245074443No Hit
CCGCGAAATTTTGATCCGTTGACAATCTGACACTCATCTTCATCACTTCA28720.11171289474871599No Hit
GCTTCCTTAACTATCAGTTGACCGAACAGTATCGAGACCTTGGGACCGGA28570.1111294360365883No Hit
AACGGTTGTTGTGGCGCTTAATAAAGCCGACCAAAAACCGATTGGCATCT27190.1057616158850135No Hit
GTGATCGCGGTCTGCATCTGCAGGCTGAGGAAAGTCCATGCCCGCACAAG26510.1031166030567013No Hit
CTGGTGCCGTTTTCTTCCCGGATCGTTGAAACCCGCTGCTAGCTATGTGG26230.10202748012739626No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)